Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm21749-201ENSMUST00000189343 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21901-201ENSMUST00000189568 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm29424-201ENSMUST00000189716 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm28599-201ENSMUST00000189838 694 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21867-201ENSMUST00000189917 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm29269-201ENSMUST00000190087 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21722-201ENSMUST00000190153 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm28423-201ENSMUST00000190701 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21899-201ENSMUST00000190745 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21910-201ENSMUST00000191163 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21849-201ENSMUST00000191571 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm28678-201ENSMUST00000191593 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm20910-201ENSMUST00000193268 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21871-201ENSMUST00000194621 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Gm8410-201ENSMUST00000117225 605 ntBASIC14.07□□□□□ -0.16
Ubp1Q811S7 Gm12134-201ENSMUST00000122109 520 ntBASIC14.07□□□□□ -0.16
Ubp1Q811S7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Gm22175-201ENSMUST00000175007 78 ntBASIC14.07□□□□□ -0.16
Ubp1Q811S7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.07□□□□□ -0.16
Ubp1Q811S7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.07□□□□□ -0.16
Ubp1Q811S7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.07□□□□□ -0.16
Ubp1Q811S7 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.07□□□□□ -0.16
Ubp1Q811S7 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.07□□□□□ -0.16
Ubp1Q811S7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ubp1Q811S7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Gm27430-201ENSMUST00000184585 107 ntBASIC14.06□□□□□ -0.16
Ubp1Q811S7 Gm44333-201ENSMUST00000197168 107 ntBASIC14.06□□□□□ -0.16
Ubp1Q811S7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.06□□□□□ -0.16
Ubp1Q811S7 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.06□□□□□ -0.16
Ubp1Q811S7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms