Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp6nlQ80XC3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Mir1938-201ENSMUST00000158746 100 ntBASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Gm44608-201ENSMUST00000206827 855 ntBASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Usp6nlQ80XC3 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Gm4984-201ENSMUST00000115987 360 ntBASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Gm6244-201ENSMUST00000178732 841 ntBASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Gm5356-201ENSMUST00000093326 615 ntBASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms