Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Gm11478-201ENSMUST00000117851 599 ntBASIC13.61□□□□□ -0.23
Vrk1Q80X41 Gm12138-201ENSMUST00000122180 951 ntBASIC13.61□□□□□ -0.23
Vrk1Q80X41 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Gm33320-201ENSMUST00000192232 530 ntBASIC13.61□□□□□ -0.23
Vrk1Q80X41 Gm43433-201ENSMUST00000196573 481 ntBASIC13.61□□□□□ -0.23
Vrk1Q80X41 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.61□□□□□ -0.23
Vrk1Q80X41 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vrk1Q80X41 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Gm12585-201ENSMUST00000117307 290 ntBASIC13.6□□□□□ -0.23
Vrk1Q80X41 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vrk1Q80X41 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vrk1Q80X41 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.59□□□□□ -0.23
Vrk1Q80X41 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Gm15393-201ENSMUST00000120499 219 ntBASIC13.59□□□□□ -0.23
Vrk1Q80X41 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Gm10275-202ENSMUST00000168697 495 ntBASIC13.59□□□□□ -0.23
Vrk1Q80X41 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.59□□□□□ -0.23
Vrk1Q80X41 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.59□□□□□ -0.23
Vrk1Q80X41 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Gm10275-201ENSMUST00000092620 635 ntBASIC13.59□□□□□ -0.23
Vrk1Q80X41 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.59□□□□□ -0.23
Vrk1Q80X41 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms