Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.59■□□□□ 0.09
Ush1gQ80T11 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.59■□□□□ 0.09
Ush1gQ80T11 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.59■□□□□ 0.09
Ush1gQ80T11 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ush1gQ80T11 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.59■□□□□ 0.09
Ush1gQ80T11 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Ush1gQ80T11 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ush1gQ80T11 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ush1gQ80T11 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Ush1gQ80T11 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Ush1gQ80T11 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Gm15824-201ENSMUST00000119516 955 ntBASIC15.58■□□□□ 0.08
Ush1gQ80T11 Gm12138-201ENSMUST00000122180 951 ntBASIC15.58■□□□□ 0.08
Ush1gQ80T11 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Gm28760-201ENSMUST00000185995 736 ntBASIC15.58■□□□□ 0.08
Ush1gQ80T11 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.58■□□□□ 0.08
Ush1gQ80T11 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.58■□□□□ 0.08
Ush1gQ80T11 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.58■□□□□ 0.08
Ush1gQ80T11 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ush1gQ80T11 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Gm8602-201ENSMUST00000184045 607 ntBASIC15.57■□□□□ 0.08
Ush1gQ80T11 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.57■□□□□ 0.08
Ush1gQ80T11 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Gm9797-201ENSMUST00000052902 613 ntBASIC15.57■□□□□ 0.08
Ush1gQ80T11 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ush1gQ80T11 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.57■□□□□ 0.08
Ush1gQ80T11 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ush1gQ80T11 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ush1gQ80T11 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ush1gQ80T11 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ush1gQ80T11 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.56■□□□□ 0.08
Ush1gQ80T11 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ush1gQ80T11 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ush1gQ80T11 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ush1gQ80T11 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ush1gQ80T11 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms