Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Gm16026-204ENSMUST00000162652 683 ntBASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Gm20445-201ENSMUST00000061905 565 ntBASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38bQ80SY5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38bQ80SY5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Gm11425-201ENSMUST00000119608 498 ntBASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Mir3102-201ENSMUST00000175555 104 ntBASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Gm9396-201ENSMUST00000076703 567 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms