Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Gm10275-202ENSMUST00000168697 495 ntBASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Gm10275-201ENSMUST00000092620 635 ntBASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scaf4Q6PFF0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Gm5479-201ENSMUST00000160578 435 ntBASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.05□□□□□ -0.16
Scaf4Q6PFF0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf4Q6PFF0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms