Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Gm17420-201ENSMUST00000164753 153 ntBASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Mir698-201ENSMUST00000102164 109 ntBASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Gm27731-201ENSMUST00000185192 107 ntBASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nup98Q6PFD9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Gm13392-201ENSMUST00000117708 150 ntBASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.51■□□□□ 0.23
Nup98Q6PFD9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Mir1982-201ENSMUST00000157368 74 ntBASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Gm8810-201ENSMUST00000172895 754 ntBASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nup98Q6PFD9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm37424-201ENSMUST00000191727 561 ntBASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm12957-201ENSMUST00000117835 377 ntBASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm12134-201ENSMUST00000122109 520 ntBASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms