Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Mir1247-201ENSMUST00000116706 82 ntBASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Gm29649-201ENSMUST00000185649 419 ntBASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Olfr582-201ENSMUST00000098212 960 ntBASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snrnp40Q6PE01 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Gm15198-201ENSMUST00000117283 177 ntBASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Gm18027-201ENSMUST00000218947 619 ntBASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Snrnp40Q6PE01 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms