Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc85bQ6PDY0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc85bQ6PDY0 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.81□□□□□ -0.04
Ccdc85bQ6PDY0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc85bQ6PDY0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc85bQ6PDY0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc85bQ6PDY0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc85bQ6PDY0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc85bQ6PDY0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc85bQ6PDY0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc85bQ6PDY0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Gm29199-201ENSMUST00000187766 775 ntBASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Gm29127-201ENSMUST00000188304 517 ntBASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Gm9823-201ENSMUST00000051212 327 ntBASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc85bQ6PDY0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc85bQ6PDY0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc85bQ6PDY0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc85bQ6PDY0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc85bQ6PDY0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc85bQ6PDY0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Ccdc85bQ6PDY0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc85bQ6PDY0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc85bQ6PDY0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc85bQ6PDY0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms