Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Gm16198-201ENSMUST00000118766 670 ntBASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcd3Q6P9Z1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.08□□□□□ -0.31
Smarcd3Q6P9Z1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcd3Q6P9Z1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Smarcd3Q6P9Z1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcd3Q6P9Z1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcd3Q6P9Z1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcd3Q6P9Z1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcd3Q6P9Z1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Gm12350-201ENSMUST00000121208 462 ntBASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Thap2-203ENSMUST00000218989 527 ntBASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd3Q6P9Z1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms