Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.21□□□□□ -0.3
AtmQ62388 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
AtmQ62388 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
AtmQ62388 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
AtmQ62388 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
AtmQ62388 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.2□□□□□ -0.3
AtmQ62388 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Gm12485-201ENSMUST00000119641 291 ntBASIC13.2□□□□□ -0.3
AtmQ62388 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
AtmQ62388 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.2□□□□□ -0.3
AtmQ62388 Gm4271-201ENSMUST00000174444 973 ntBASIC13.2□□□□□ -0.3
AtmQ62388 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.2□□□□□ -0.3
AtmQ62388 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.2□□□□□ -0.3
AtmQ62388 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.2□□□□□ -0.3
AtmQ62388 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.2□□□□□ -0.3
AtmQ62388 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
AtmQ62388 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AtmQ62388 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
AtmQ62388 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
AtmQ62388 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Gm13369-201ENSMUST00000119442 987 ntBASIC13.19□□□□□ -0.3
AtmQ62388 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.19□□□□□ -0.3
AtmQ62388 Gm37497-201ENSMUST00000195830 798 ntBASIC13.19□□□□□ -0.3
AtmQ62388 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.19□□□□□ -0.3
AtmQ62388 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.19□□□□□ -0.3
AtmQ62388 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
AtmQ62388 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.19□□□□□ -0.3
AtmQ62388 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.19□□□□□ -0.3
AtmQ62388 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
AtmQ62388 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
AtmQ62388 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.19□□□□□ -0.3
AtmQ62388 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
AtmQ62388 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.19□□□□□ -0.3
AtmQ62388 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Gm24990-201ENSMUST00000157406 323 ntBASIC13.19□□□□□ -0.3
AtmQ62388 Gm45186-201ENSMUST00000206874 478 ntBASIC13.19□□□□□ -0.3
AtmQ62388 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AtmQ62388 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.18□□□□□ -0.3
AtmQ62388 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.18□□□□□ -0.3
AtmQ62388 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.18□□□□□ -0.3
AtmQ62388 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.18□□□□□ -0.3
AtmQ62388 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
AtmQ62388 Gm20482-202ENSMUST00000174729 825 ntBASIC13.18□□□□□ -0.3
AtmQ62388 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.18□□□□□ -0.3
AtmQ62388 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.18□□□□□ -0.3
AtmQ62388 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
AtmQ62388 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.18□□□□□ -0.3
AtmQ62388 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.18□□□□□ -0.3
AtmQ62388 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
AtmQ62388 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms