Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox19Q62249 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox19Q62249 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox19Q62249 Gm5682-201ENSMUST00000173402 505 ntBASIC12.15□□□□□ -0.46
Sox19Q62249 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox19Q62249 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox19Q62249 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sox19Q62249 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox19Q62249 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox19Q62249 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox19Q62249 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox19Q62249 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox19Q62249 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox19Q62249 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox19Q62249 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox19Q62249 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox19Q62249 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox19Q62249 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox19Q62249 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox19Q62249 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.14□□□□□ -0.47
Sox19Q62249 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox19Q62249 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox19Q62249 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Sox19Q62249 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.14□□□□□ -0.47
Sox19Q62249 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox19Q62249 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.14□□□□□ -0.47
Sox19Q62249 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Sox19Q62249 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox19Q62249 Gm18041-201ENSMUST00000218210 618 ntBASIC12.14□□□□□ -0.47
Sox19Q62249 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.14□□□□□ -0.47
Sox19Q62249 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Sox19Q62249 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sox19Q62249 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sox19Q62249 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sox19Q62249 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox19Q62249 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox19Q62249 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox19Q62249 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox19Q62249 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.13□□□□□ -0.47
Sox19Q62249 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox19Q62249 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox19Q62249 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sox19Q62249 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox19Q62249 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sox19Q62249 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sox19Q62249 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox19Q62249 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox19Q62249 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.13□□□□□ -0.47
Sox19Q62249 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox19Q62249 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms