Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
SspnQ62147 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SspnQ62147 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SspnQ62147 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SspnQ62147 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SspnQ62147 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
SspnQ62147 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
SspnQ62147 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SspnQ62147 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SspnQ62147 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.95□□□□□ -0.5
SspnQ62147 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.95□□□□□ -0.5
SspnQ62147 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Gm12260-201ENSMUST00000122447 411 ntBASIC11.95□□□□□ -0.5
SspnQ62147 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Gm5364-201ENSMUST00000216789 889 ntBASIC11.95□□□□□ -0.5
SspnQ62147 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.95□□□□□ -0.5
SspnQ62147 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SspnQ62147 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.95□□□□□ -0.5
SspnQ62147 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.95□□□□□ -0.5
SspnQ62147 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SspnQ62147 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.94□□□□□ -0.5
SspnQ62147 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.94□□□□□ -0.5
SspnQ62147 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SspnQ62147 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.94□□□□□ -0.5
SspnQ62147 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SspnQ62147 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.94□□□□□ -0.5
SspnQ62147 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.94□□□□□ -0.5
SspnQ62147 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.94□□□□□ -0.5
SspnQ62147 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.94□□□□□ -0.5
SspnQ62147 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SspnQ62147 Gm9182-201ENSMUST00000217829 639 ntBASIC11.94□□□□□ -0.5
SspnQ62147 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.94□□□□□ -0.5
SspnQ62147 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.94□□□□□ -0.5
SspnQ62147 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.94□□□□□ -0.5
SspnQ62147 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SspnQ62147 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.94□□□□□ -0.5
SspnQ62147 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SspnQ62147 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.94□□□□□ -0.5
SspnQ62147 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SspnQ62147 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
SspnQ62147 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.94□□□□□ -0.5
SspnQ62147 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SspnQ62147 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
SspnQ62147 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SspnQ62147 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.93□□□□□ -0.5
SspnQ62147 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SspnQ62147 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SspnQ62147 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
SspnQ62147 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SspnQ62147 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SspnQ62147 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SspnQ62147 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SspnQ62147 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SspnQ62147 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.93□□□□□ -0.5
SspnQ62147 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.93□□□□□ -0.5
SspnQ62147 Gm9385-201ENSMUST00000117563 472 ntBASIC11.93□□□□□ -0.5
SspnQ62147 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms