Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm24694-201ENSMUST00000180054 110 ntBASIC14.83□□□□□ -0.04
Smarcd1Q61466 Gm27663-201ENSMUST00000184839 110 ntBASIC14.83□□□□□ -0.04
Smarcd1Q61466 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.83□□□□□ -0.04
Smarcd1Q61466 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.82□□□□□ -0.04
Smarcd1Q61466 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.82□□□□□ -0.04
Smarcd1Q61466 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.82□□□□□ -0.04
Smarcd1Q61466 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd1Q61466 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Gm29667-201ENSMUST00000190817 490 ntBASIC14.81□□□□□ -0.04
Smarcd1Q61466 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.81□□□□□ -0.04
Smarcd1Q61466 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd1Q61466 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Gm15321-201ENSMUST00000121290 288 ntBASIC14.8□□□□□ -0.04
Smarcd1Q61466 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Gm16215-201ENSMUST00000161990 637 ntBASIC14.8□□□□□ -0.04
Smarcd1Q61466 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms