Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vsx2Q61412 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.92□□□□□ -0.18
Vsx2Q61412 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vsx2Q61412 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.91□□□□□ -0.18
Vsx2Q61412 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vsx2Q61412 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vsx2Q61412 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Vsx2Q61412 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vsx2Q61412 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vsx2Q61412 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Vsx2Q61412 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.91□□□□□ -0.18
Vsx2Q61412 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.91□□□□□ -0.18
Vsx2Q61412 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.91□□□□□ -0.18
Vsx2Q61412 Gm7774-201ENSMUST00000200064 533 ntBASIC13.91□□□□□ -0.18
Vsx2Q61412 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.91□□□□□ -0.18
Vsx2Q61412 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Vsx2Q61412 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vsx2Q61412 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx2Q61412 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Gm25287-201ENSMUST00000103846 110 ntBASIC13.9□□□□□ -0.18
Vsx2Q61412 Gm22918-201ENSMUST00000103855 110 ntBASIC13.9□□□□□ -0.18
Vsx2Q61412 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.9□□□□□ -0.18
Vsx2Q61412 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Gm5479-201ENSMUST00000160578 435 ntBASIC13.9□□□□□ -0.18
Vsx2Q61412 Gm9726-201ENSMUST00000180321 678 ntBASIC13.9□□□□□ -0.18
Vsx2Q61412 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.9□□□□□ -0.18
Vsx2Q61412 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vsx2Q61412 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Vsx2Q61412 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.9□□□□□ -0.18
Vsx2Q61412 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vsx2Q61412 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.9□□□□□ -0.18
Vsx2Q61412 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx2Q61412 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
Vsx2Q61412 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Vsx2Q61412 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx2Q61412 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx2Q61412 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx2Q61412 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx2Q61412 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx2Q61412 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.89□□□□□ -0.19
Vsx2Q61412 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx2Q61412 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vsx2Q61412 Gm22065-201ENSMUST00000103753 110 ntBASIC13.89□□□□□ -0.19
Vsx2Q61412 Gm22066-201ENSMUST00000103761 110 ntBASIC13.89□□□□□ -0.19
Vsx2Q61412 Gm24932-201ENSMUST00000103763 110 ntBASIC13.89□□□□□ -0.19
Vsx2Q61412 Gm24115-201ENSMUST00000103799 110 ntBASIC13.89□□□□□ -0.19
Vsx2Q61412 Gm22190-201ENSMUST00000103827 110 ntBASIC13.89□□□□□ -0.19
Vsx2Q61412 Gm22191-201ENSMUST00000103831 110 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms