Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.64■□□□□ 0.09
Col11a1Q61245 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.63■□□□□ 0.09
Col11a1Q61245 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.63■□□□□ 0.09
Col11a1Q61245 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.63■□□□□ 0.09
Col11a1Q61245 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.63■□□□□ 0.09
Col11a1Q61245 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col11a1Q61245 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.63■□□□□ 0.09
Col11a1Q61245 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.63■□□□□ 0.09
Col11a1Q61245 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Gm16479-201ENSMUST00000121706 932 ntBASIC15.63■□□□□ 0.09
Col11a1Q61245 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.63■□□□□ 0.09
Col11a1Q61245 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.63■□□□□ 0.09
Col11a1Q61245 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.63■□□□□ 0.09
Col11a1Q61245 Gm26315-201ENSMUST00000083890 321 ntBASIC15.63■□□□□ 0.09
Col11a1Q61245 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.63■□□□□ 0.09
Col11a1Q61245 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a1Q61245 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.62■□□□□ 0.09
Col11a1Q61245 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.62■□□□□ 0.09
Col11a1Q61245 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.62■□□□□ 0.09
Col11a1Q61245 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.62■□□□□ 0.09
Col11a1Q61245 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Col11a1Q61245 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.62■□□□□ 0.09
Col11a1Q61245 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col11a1Q61245 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col11a1Q61245 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Gm16379-201ENSMUST00000161469 348 ntBASIC15.61■□□□□ 0.09
Col11a1Q61245 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Col11a1Q61245 Gm8762-201ENSMUST00000193486 339 ntBASIC15.61■□□□□ 0.09
Col11a1Q61245 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.61■□□□□ 0.09
Col11a1Q61245 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Col11a1Q61245 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.61■□□□□ 0.09
Col11a1Q61245 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.61■□□□□ 0.09
Col11a1Q61245 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.61■□□□□ 0.09
Col11a1Q61245 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Col11a1Q61245 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.61■□□□□ 0.09
Col11a1Q61245 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a1Q61245 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
Col11a1Q61245 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col11a1Q61245 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Col11a1Q61245 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col11a1Q61245 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col11a1Q61245 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms