Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FntaQ61239 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FntaQ61239 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FntaQ61239 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FntaQ61239 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FntaQ61239 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
FntaQ61239 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FntaQ61239 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.09■□□□□ 0.01
FntaQ61239 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
FntaQ61239 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FntaQ61239 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
FntaQ61239 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FntaQ61239 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.09■□□□□ 0.01
FntaQ61239 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
FntaQ61239 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
FntaQ61239 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FntaQ61239 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
FntaQ61239 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FntaQ61239 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.09■□□□□ 0.01
FntaQ61239 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
FntaQ61239 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
FntaQ61239 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FntaQ61239 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
FntaQ61239 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
FntaQ61239 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Gm7153-201ENSMUST00000117092 455 ntBASIC15.08■□□□□ 0
FntaQ61239 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.08■□□□□ 0
FntaQ61239 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.08■□□□□ 0
FntaQ61239 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.08■□□□□ 0
FntaQ61239 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.08■□□□□ 0
FntaQ61239 Gm10819-201ENSMUST00000099988 561 ntBASIC15.08■□□□□ 0
FntaQ61239 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.08■□□□□ 0
FntaQ61239 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.08■□□□□ 0
FntaQ61239 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FntaQ61239 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.07■□□□□ 0
FntaQ61239 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Gm24589-201ENSMUST00000116692 94 ntBASIC15.07■□□□□ 0
FntaQ61239 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.07■□□□□ 0
FntaQ61239 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.07■□□□□ 0
FntaQ61239 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
FntaQ61239 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.07■□□□□ 0
FntaQ61239 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
FntaQ61239 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.07■□□□□ 0
FntaQ61239 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms