Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm12566-201ENSMUST00000121479 359 ntBASIC13.78□□□□□ -0.2
Col12a1Q60847 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.78□□□□□ -0.2
Col12a1Q60847 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.77□□□□□ -0.2
Col12a1Q60847 Gm23200-201ENSMUST00000104379 132 ntBASIC13.77□□□□□ -0.2
Col12a1Q60847 Snord83b-201ENSMUST00000104546 94 ntBASIC13.77□□□□□ -0.2
Col12a1Q60847 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
Col12a1Q60847 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
Col12a1Q60847 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.77□□□□□ -0.2
Col12a1Q60847 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.77□□□□□ -0.2
Col12a1Q60847 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Col12a1Q60847 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col12a1Q60847 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col12a1Q60847 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.77□□□□□ -0.21
Col12a1Q60847 Gm11439-201ENSMUST00000118598 409 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 Gm7467-201ENSMUST00000185173 652 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.77□□□□□ -0.21
Col12a1Q60847 Morn2-202ENSMUST00000227729 656 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Col12a1Q60847 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 Mir1943-201ENSMUST00000158276 73 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.77□□□□□ -0.21
Col12a1Q60847 Gm20426-201ENSMUST00000173657 440 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 Gm18027-201ENSMUST00000218947 619 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Col12a1Q60847 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col12a1Q60847 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.77□□□□□ -0.21
Col12a1Q60847 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col12a1Q60847 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.76□□□□□ -0.21
Col12a1Q60847 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Gm2260-201ENSMUST00000184965 657 ntBASIC13.76□□□□□ -0.21
Col12a1Q60847 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.76□□□□□ -0.21
Col12a1Q60847 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.76□□□□□ -0.21
Col12a1Q60847 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col12a1Q60847 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.76□□□□□ -0.21
Col12a1Q60847 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Col12a1Q60847 Gm37835-201ENSMUST00000193305 361 ntBASIC13.76□□□□□ -0.21
Col12a1Q60847 Gm42997-202ENSMUST00000200321 985 ntBASIC13.76□□□□□ -0.21
Col12a1Q60847 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.76□□□□□ -0.21
Col12a1Q60847 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col12a1Q60847 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Col12a1Q60847 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col12a1Q60847 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Col12a1Q60847 Gm16379-201ENSMUST00000161469 348 ntBASIC13.75□□□□□ -0.21
Col12a1Q60847 Gm8762-201ENSMUST00000193486 339 ntBASIC13.75□□□□□ -0.21
Col12a1Q60847 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.75□□□□□ -0.21
Col12a1Q60847 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col12a1Q60847 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms