Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Gm13036-201ENSMUST00000117799 748 ntBASIC13.59□□□□□ -0.23
Nr1h4Q60641 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Nr1h4Q60641 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.59□□□□□ -0.23
Nr1h4Q60641 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.59□□□□□ -0.23
Nr1h4Q60641 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nr1h4Q60641 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Nr1h4Q60641 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nr1h4Q60641 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nr1h4Q60641 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Gm24589-201ENSMUST00000116692 94 ntBASIC13.58□□□□□ -0.24
Nr1h4Q60641 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.58□□□□□ -0.24
Nr1h4Q60641 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Nr1h4Q60641 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.57□□□□□ -0.24
Nr1h4Q60641 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nr1h4Q60641 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms