Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Gm12859-201ENSMUST00000117834 427 ntBASIC15.16■□□□□ 0.02
Shroom1Q5SX79 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom1Q5SX79 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom1Q5SX79 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gm9794-201ENSMUST00000202370 423 ntBASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gm6218-201ENSMUST00000219812 628 ntBASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Mir125a-201ENSMUST00000083545 68 ntBASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shroom1Q5SX79 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms