Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Gm45612-201ENSMUST00000211320 160 ntBASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Gm4995-201ENSMUST00000117247 432 ntBASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Gm11745-201ENSMUST00000121669 448 ntBASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Gm18057-201ENSMUST00000208220 503 ntBASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5d-4Q5R1F6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Rprl2-201ENSMUST00000157150 290 ntBASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms