Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav3-3Q5R1C3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.7
Trav3-3Q5R1C3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3-3Q5R1C3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3-3Q5R1C3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3-3Q5R1C3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Rprl3-201ENSMUST00000157400 290 ntBASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Gm1818-201ENSMUST00000169406 1184 ntBASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-3Q5R1C3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Gm13312-201ENSMUST00000119631 718 ntBASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Gm11950-201ENSMUST00000121615 838 ntBASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Mir6982-201ENSMUST00000184354 68 ntBASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-3Q5R1C3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav3-3Q5R1C3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms