Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Gm9726-201ENSMUST00000180321 678 ntBASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Mir1943-201ENSMUST00000158276 73 ntBASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps13aQ5H8C4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Gm10608-202ENSMUST00000213924 676 ntBASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps13aQ5H8C4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Gm14130-201ENSMUST00000118417 987 ntBASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Gm15370-201ENSMUST00000117158 253 ntBASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps13aQ5H8C4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Vps13aQ5H8C4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps13aQ5H8C4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.8□□□□□ -0.2
Vps13aQ5H8C4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vps13aQ5H8C4 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.8□□□□□ -0.2
Vps13aQ5H8C4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps13aQ5H8C4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps13aQ5H8C4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Vps13aQ5H8C4 Gm20426-201ENSMUST00000173657 440 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms