Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Fndc4Q3TR08 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Gm27300-201ENSMUST00000184085 97 ntBASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Gm27335-201ENSMUST00000184758 97 ntBASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Gm44771-201ENSMUST00000206975 626 ntBASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.17□□□□□ -0.46
Fndc4Q3TR08 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.16□□□□□ -0.46
Fndc4Q3TR08 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.16□□□□□ -0.46
Fndc4Q3TR08 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fndc4Q3TR08 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms