Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Gm14140-201ENSMUST00000119999 995 ntBASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Gm16026-204ENSMUST00000162652 683 ntBASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Gm27525-201ENSMUST00000184465 107 ntBASIC15.11■□□□□ 0.01
Trim43aQ3TL54 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.11■□□□□ 0.01
Trim43aQ3TL54 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43aQ3TL54 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Gm27628-201ENSMUST00000184911 107 ntBASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43aQ3TL54 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43aQ3TL54 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms