Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Gm14767-201ENSMUST00000121559 586 ntBASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Khdc4Q3TCX3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Khdc4Q3TCX3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Khdc4Q3TCX3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.55□□□□□ -0.24
Khdc4Q3TCX3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Khdc4Q3TCX3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Khdc4Q3TCX3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Khdc4Q3TCX3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Khdc4Q3TCX3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Khdc4Q3TCX3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Khdc4Q3TCX3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Khdc4Q3TCX3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Khdc4Q3TCX3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms