Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Gm15483-201ENSMUST00000120338 456 ntBASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nhej1Q3KNJ2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhej1Q3KNJ2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Gm2651-201ENSMUST00000203560 838 ntBASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Matn2-206ENSMUST00000228570 2798 ntBASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhej1Q3KNJ2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhej1Q3KNJ2 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms