Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Gm27023-201ENSMUST00000182372 285 ntBASIC16.07■□□□□ 0.16
SobpQ0P5V2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.07■□□□□ 0.16
SobpQ0P5V2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.07■□□□□ 0.16
SobpQ0P5V2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.06■□□□□ 0.16
SobpQ0P5V2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.06■□□□□ 0.16
SobpQ0P5V2 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.06■□□□□ 0.16
SobpQ0P5V2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.06■□□□□ 0.16
SobpQ0P5V2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Gm18027-201ENSMUST00000218947 619 ntBASIC16.06■□□□□ 0.16
SobpQ0P5V2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SobpQ0P5V2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SobpQ0P5V2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.05■□□□□ 0.16
SobpQ0P5V2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Gm37922-201ENSMUST00000195596 455 ntBASIC16.05■□□□□ 0.16
SobpQ0P5V2 Gm44545-201ENSMUST00000208262 746 ntBASIC16.05■□□□□ 0.16
SobpQ0P5V2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Morn2-202ENSMUST00000227729 656 ntBASIC16.05■□□□□ 0.16
SobpQ0P5V2 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Gm10146-201ENSMUST00000072739 309 ntBASIC16.05■□□□□ 0.16
SobpQ0P5V2 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SobpQ0P5V2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SobpQ0P5V2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.04■□□□□ 0.16
SobpQ0P5V2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.04■□□□□ 0.16
SobpQ0P5V2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Gm11591-201ENSMUST00000120063 702 ntBASIC16.04■□□□□ 0.16
SobpQ0P5V2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC16.04■□□□□ 0.16
SobpQ0P5V2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Gm9550-201ENSMUST00000161130 862 ntBASIC16.04■□□□□ 0.16
SobpQ0P5V2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SobpQ0P5V2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SobpQ0P5V2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SobpQ0P5V2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms