Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.26□□□□□ -0.77
Hspg2Q05793 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.26□□□□□ -0.77
Hspg2Q05793 Gm18935-201ENSMUST00000212692 664 ntBASIC10.26□□□□□ -0.77
Hspg2Q05793 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Hspg2Q05793 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.26□□□□□ -0.77
Hspg2Q05793 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.25□□□□□ -0.77
Hspg2Q05793 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Hspg2Q05793 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Gm6152-201ENSMUST00000151704 340 ntBASIC10.25□□□□□ -0.77
Hspg2Q05793 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.25□□□□□ -0.77
Hspg2Q05793 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.25□□□□□ -0.77
Hspg2Q05793 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.25□□□□□ -0.77
Hspg2Q05793 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Hspg2Q05793 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Hspg2Q05793 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Gm9726-201ENSMUST00000180321 678 ntBASIC10.25□□□□□ -0.77
Hspg2Q05793 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Gm37497-201ENSMUST00000195830 798 ntBASIC10.25□□□□□ -0.77
Hspg2Q05793 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hspg2Q05793 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Gm18556-201ENSMUST00000219748 1031 ntBASIC10.24□□□□□ -0.77
Hspg2Q05793 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.24□□□□□ -0.77
Hspg2Q05793 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.24□□□□□ -0.77
Hspg2Q05793 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.24□□□□□ -0.77
Hspg2Q05793 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.24□□□□□ -0.77
Hspg2Q05793 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.24□□□□□ -0.77
Hspg2Q05793 Gm38223-201ENSMUST00000194484 695 ntBASIC10.24□□□□□ -0.77
Hspg2Q05793 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.24□□□□□ -0.77
Hspg2Q05793 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Hspg2Q05793 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hspg2Q05793 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.23□□□□□ -0.77
Hspg2Q05793 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hspg2Q05793 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.23□□□□□ -0.77
Hspg2Q05793 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Hspg2Q05793 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.23□□□□□ -0.77
Hspg2Q05793 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms