Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Xrn1P97789 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Gm44981-201ENSMUST00000205549 1943 ntBASIC19.88■□□□□ 0.77
Xrn1P97789 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
Xrn1P97789 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.88■□□□□ 0.77
Xrn1P97789 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Mir3102-201ENSMUST00000175555 104 ntBASIC19.88■□□□□ 0.77
Xrn1P97789 Mir7070-201ENSMUST00000183657 86 ntBASIC19.88■□□□□ 0.77
Xrn1P97789 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC19.88■□□□□ 0.77
Xrn1P97789 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC19.88■□□□□ 0.77
Xrn1P97789 Gm45865-201ENSMUST00000211815 945 ntBASIC19.88■□□□□ 0.77
Xrn1P97789 Gm2824-203ENSMUST00000226189 1228 ntBASIC19.88■□□□□ 0.77
Xrn1P97789 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Xrn1P97789 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Xrn1P97789 Fbxl12-205ENSMUST00000140702 1555 ntBASIC19.87■□□□□ 0.77
Xrn1P97789 Gm45684-201ENSMUST00000210244 1571 ntBASIC19.87■□□□□ 0.77
Xrn1P97789 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrn1P97789 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Xrn1P97789 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrn1P97789 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Xrn1P97789 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Xrn1P97789 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrn1P97789 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC19.87■□□□□ 0.77
Xrn1P97789 Gm29199-201ENSMUST00000187766 775 ntBASIC19.87■□□□□ 0.77
Xrn1P97789 CT573086.1-201ENSMUST00000227202 1074 ntBASIC19.87■□□□□ 0.77
Xrn1P97789 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrn1P97789 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrn1P97789 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Gm10584-201ENSMUST00000207036 2628 ntBASIC19.86■□□□□ 0.77
Xrn1P97789 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Xrn1P97789 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Xrn1P97789 Gm6621-201ENSMUST00000193251 772 ntBASIC19.86■□□□□ 0.77
Xrn1P97789 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Xrn1P97789 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Xrn1P97789 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 Gm38000-201ENSMUST00000192390 1215 ntBASIC19.85■□□□□ 0.77
Xrn1P97789 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC19.85■□□□□ 0.77
Xrn1P97789 Gm18935-201ENSMUST00000212692 664 ntBASIC19.85■□□□□ 0.77
Xrn1P97789 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Xrn1P97789 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Xrn1P97789 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC19.85■□□□□ 0.77
Xrn1P97789 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 Gm3890-201ENSMUST00000182416 207 ntBASIC19.85■□□□□ 0.77
Xrn1P97789 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrn1P97789 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC19.85■□□□□ 0.77
Xrn1P97789 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Xrn1P97789 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.84■□□□□ 0.77
Xrn1P97789 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.84■□□□□ 0.77
Xrn1P97789 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 AC153366.2-201ENSMUST00000219461 1984 ntBASIC19.84■□□□□ 0.77
Xrn1P97789 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Xrn1P97789 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC19.84■□□□□ 0.77
Xrn1P97789 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Gm10268-201ENSMUST00000085340 555 ntBASIC19.84■□□□□ 0.77
Xrn1P97789 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC19.84■□□□□ 0.77
Xrn1P97789 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrn1P97789 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Xrn1P97789 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Xrn1P97789 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Xrn1P97789 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms