Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gfra1P97785 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gfra1P97785 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.78□□□□□ -0.52
Gfra1P97785 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.78□□□□□ -0.52
Gfra1P97785 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gfra1P97785 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gfra1P97785 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Gm12134-201ENSMUST00000122109 520 ntBASIC11.78□□□□□ -0.52
Gfra1P97785 Gm10275-202ENSMUST00000168697 495 ntBASIC11.78□□□□□ -0.52
Gfra1P97785 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.78□□□□□ -0.52
Gfra1P97785 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Gfra1P97785 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Gm9063-201ENSMUST00000223299 582 ntBASIC11.78□□□□□ -0.52
Gfra1P97785 Shd-206ENSMUST00000225145 998 ntBASIC11.78□□□□□ -0.52
Gfra1P97785 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Gm10275-201ENSMUST00000092620 635 ntBASIC11.78□□□□□ -0.52
Gfra1P97785 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gfra1P97785 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.78□□□□□ -0.52
Gfra1P97785 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gfra1P97785 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Gfra1P97785 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gfra1P97785 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gfra1P97785 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Gfra1P97785 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Gfra1P97785 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gfra1P97785 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Gfra1P97785 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gfra1P97785 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gfra1P97785 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gfra1P97785 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Gfra1P97785 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gfra1P97785 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Gfra1P97785 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Gfra1P97785 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.77□□□□□ -0.52
Gfra1P97785 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Gfra1P97785 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.77□□□□□ -0.53
Gfra1P97785 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.77□□□□□ -0.53
Gfra1P97785 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.77□□□□□ -0.53
Gfra1P97785 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.77□□□□□ -0.53
Gfra1P97785 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Mir1897-201ENSMUST00000122581 272 ntBASIC11.77□□□□□ -0.53
Gfra1P97785 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.77□□□□□ -0.53
Gfra1P97785 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.77□□□□□ -0.53
Gfra1P97785 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Gm3436-201ENSMUST00000179930 840 ntBASIC11.77□□□□□ -0.53
Gfra1P97785 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.77□□□□□ -0.53
Gfra1P97785 Gm46209-201ENSMUST00000217912 553 ntBASIC11.77□□□□□ -0.53
Gfra1P97785 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.77□□□□□ -0.53
Gfra1P97785 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.77□□□□□ -0.53
Gfra1P97785 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gfra1P97785 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.76□□□□□ -0.53
Gfra1P97785 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gfra1P97785 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Gfra1P97785 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Gfra1P97785 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gfra1P97785 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gfra1P97785 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gfra1P97785 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms