Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Thumpd3P97770 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Thumpd3P97770 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd3P97770 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Thumpd3P97770 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.52□□□□□ -0.08
Thumpd3P97770 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Thumpd3P97770 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Thumpd3P97770 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd3P97770 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.52□□□□□ -0.09
Thumpd3P97770 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.52□□□□□ -0.09
Thumpd3P97770 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.52□□□□□ -0.09
Thumpd3P97770 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Gm17968-201ENSMUST00000194902 784 ntBASIC14.52□□□□□ -0.09
Thumpd3P97770 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Gm18246-201ENSMUST00000221023 728 ntBASIC14.52□□□□□ -0.09
Thumpd3P97770 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.52□□□□□ -0.09
Thumpd3P97770 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Thumpd3P97770 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Thumpd3P97770 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.52□□□□□ -0.09
Thumpd3P97770 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd3P97770 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.51□□□□□ -0.09
Thumpd3P97770 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.51□□□□□ -0.09
Thumpd3P97770 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Thumpd3P97770 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Thumpd3P97770 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.51□□□□□ -0.09
Thumpd3P97770 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.51□□□□□ -0.09
Thumpd3P97770 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Thumpd3P97770 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.51□□□□□ -0.09
Thumpd3P97770 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.51□□□□□ -0.09
Thumpd3P97770 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Thumpd3P97770 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.51□□□□□ -0.09
Thumpd3P97770 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.51□□□□□ -0.09
Thumpd3P97770 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.51□□□□□ -0.09
Thumpd3P97770 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Thumpd3P97770 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd3P97770 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd3P97770 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.5□□□□□ -0.09
Thumpd3P97770 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Thumpd3P97770 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd3P97770 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd3P97770 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Thumpd3P97770 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd3P97770 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.5□□□□□ -0.09
Thumpd3P97770 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd3P97770 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Thumpd3P97770 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Thumpd3P97770 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms