Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trim43bP86448 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Gm13597-201ENSMUST00000121239 375 ntBASIC14.67□□□□□ -0.06
Trim43bP86448 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Gm27494-201ENSMUST00000184735 189 ntBASIC14.67□□□□□ -0.06
Trim43bP86448 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim43bP86448 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
Trim43bP86448 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.67□□□□□ -0.06
Trim43bP86448 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim43bP86448 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim43bP86448 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim43bP86448 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43bP86448 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim43bP86448 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim43bP86448 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim43bP86448 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Trim43bP86448 Gm17968-201ENSMUST00000194902 784 ntBASIC14.66□□□□□ -0.06
Trim43bP86448 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim43bP86448 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim43bP86448 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim43bP86448 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim43bP86448 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim43bP86448 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim43bP86448 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43bP86448 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim43bP86448 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Trim43bP86448 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.65□□□□□ -0.06
Trim43bP86448 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim43bP86448 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim43bP86448 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim43bP86448 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.65□□□□□ -0.06
Trim43bP86448 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim43bP86448 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Chchd1-203ENSMUST00000224633 557 ntBASIC14.65□□□□□ -0.06
Trim43bP86448 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Trim43bP86448 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim43bP86448 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.65□□□□□ -0.06
Trim43bP86448 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim43bP86448 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim43bP86448 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim43bP86448 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim43bP86448 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms