Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Crnkl1P63154 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Crnkl1P63154 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Crnkl1P63154 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Crnkl1P63154 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Crnkl1P63154 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
Crnkl1P63154 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.11□□□□□ -0.15
Crnkl1P63154 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Crnkl1P63154 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.11□□□□□ -0.15
Crnkl1P63154 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Crnkl1P63154 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.11□□□□□ -0.15
Crnkl1P63154 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Gm10060-201ENSMUST00000212002 111 ntBASIC14.11□□□□□ -0.15
Crnkl1P63154 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.11□□□□□ -0.15
Crnkl1P63154 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Crnkl1P63154 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Crnkl1P63154 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Crnkl1P63154 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Crnkl1P63154 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Gm18733-201ENSMUST00000173950 856 ntBASIC14.1□□□□□ -0.15
Crnkl1P63154 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Crnkl1P63154 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Crnkl1P63154 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.09□□□□□ -0.15
Crnkl1P63154 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Gm15173-201ENSMUST00000122049 433 ntBASIC14.09□□□□□ -0.15
Crnkl1P63154 Gm11780-201ENSMUST00000136880 516 ntBASIC14.09□□□□□ -0.15
Crnkl1P63154 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Gm6089-201ENSMUST00000197666 938 ntBASIC14.09□□□□□ -0.15
Crnkl1P63154 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.09□□□□□ -0.15
Crnkl1P63154 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms