Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ybx1P62960 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Ybx1P62960 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ybx1P62960 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.58□□□□□ -0.08
Ybx1P62960 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ybx1P62960 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ybx1P62960 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ybx1P62960 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.57□□□□□ -0.08
Ybx1P62960 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.57□□□□□ -0.08
Ybx1P62960 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ybx1P62960 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.57□□□□□ -0.08
Ybx1P62960 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.57□□□□□ -0.08
Ybx1P62960 Gm5354-201ENSMUST00000182417 973 ntBASIC14.57□□□□□ -0.08
Ybx1P62960 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.57□□□□□ -0.08
Ybx1P62960 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.57□□□□□ -0.08
Ybx1P62960 Gm18062-201ENSMUST00000208020 547 ntBASIC14.57□□□□□ -0.08
Ybx1P62960 Gm18055-201ENSMUST00000208254 547 ntBASIC14.57□□□□□ -0.08
Ybx1P62960 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.57□□□□□ -0.08
Ybx1P62960 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ybx1P62960 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ybx1P62960 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ybx1P62960 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.56□□□□□ -0.08
Ybx1P62960 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ybx1P62960 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.56□□□□□ -0.08
Ybx1P62960 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ybx1P62960 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Ybx1P62960 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ybx1P62960 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.56□□□□□ -0.08
Ybx1P62960 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ybx1P62960 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ybx1P62960 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ybx1P62960 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ybx1P62960 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Ybx1P62960 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.55□□□□□ -0.08
Ybx1P62960 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ybx1P62960 Gm28911-201ENSMUST00000188837 117 ntBASIC14.55□□□□□ -0.08
Ybx1P62960 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.55□□□□□ -0.08
Ybx1P62960 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.55□□□□□ -0.08
Ybx1P62960 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms