Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm6P62313 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm6P62313 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.52□□□□□ -0.41
Lsm6P62313 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm6P62313 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lsm6P62313 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.52□□□□□ -0.41
Lsm6P62313 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm6P62313 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm6P62313 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lsm6P62313 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.51□□□□□ -0.41
Lsm6P62313 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.51□□□□□ -0.41
Lsm6P62313 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lsm6P62313 Gm18049-201ENSMUST00000208909 581 ntBASIC12.51□□□□□ -0.41
Lsm6P62313 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Lsm6P62313 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.51□□□□□ -0.41
Lsm6P62313 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm6P62313 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm6P62313 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm6P62313 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.51□□□□□ -0.41
Lsm6P62313 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm6P62313 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm6P62313 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm6P62313 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Lsm6P62313 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lsm6P62313 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lsm6P62313 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm6P62313 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.5□□□□□ -0.41
Lsm6P62313 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.5□□□□□ -0.41
Lsm6P62313 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm6P62313 Mir6990-201ENSMUST00000183724 91 ntBASIC12.5□□□□□ -0.41
Lsm6P62313 Gm2756-201ENSMUST00000195851 400 ntBASIC12.5□□□□□ -0.41
Lsm6P62313 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm6P62313 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm6P62313 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Lsm6P62313 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.5□□□□□ -0.41
Lsm6P62313 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Lsm6P62313 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lsm6P62313 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm6P62313 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm6P62313 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.49□□□□□ -0.41
Lsm6P62313 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm6P62313 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm6P62313 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lsm6P62313 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm6P62313 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms