Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lsm3P62311 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.98□□□□□ -0.33
Lsm3P62311 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm3P62311 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm3P62311 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.98□□□□□ -0.33
Lsm3P62311 Gm25745-201ENSMUST00000174945 133 ntBASIC12.98□□□□□ -0.33
Lsm3P62311 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Lsm3P62311 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lsm3P62311 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.98□□□□□ -0.33
Lsm3P62311 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.98□□□□□ -0.33
Lsm3P62311 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm3P62311 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Lsm3P62311 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Lsm3P62311 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Lsm3P62311 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Lsm3P62311 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Lsm3P62311 Gm4459-201ENSMUST00000118750 468 ntBASIC12.97□□□□□ -0.33
Lsm3P62311 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.97□□□□□ -0.33
Lsm3P62311 Gm8520-201ENSMUST00000186517 868 ntBASIC12.97□□□□□ -0.33
Lsm3P62311 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.97□□□□□ -0.33
Lsm3P62311 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lsm3P62311 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lsm3P62311 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.97□□□□□ -0.33
Lsm3P62311 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.97□□□□□ -0.33
Lsm3P62311 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.97□□□□□ -0.33
Lsm3P62311 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm3P62311 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Gm44454-201ENSMUST00000198541 138 ntBASIC12.96□□□□□ -0.33
Lsm3P62311 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Gm10812-201ENSMUST00000099864 546 ntBASIC12.96□□□□□ -0.33
Lsm3P62311 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Lsm3P62311 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.96□□□□□ -0.33
Lsm3P62311 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm3P62311 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
Lsm3P62311 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.96□□□□□ -0.34
Lsm3P62311 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Lsm3P62311 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm3P62311 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lsm3P62311 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lsm3P62311 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.95□□□□□ -0.34
Lsm3P62311 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm3P62311 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms