Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Lim2P56563 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.27□□□□□ -0.13
Lim2P56563 Gm5566-201ENSMUST00000116118 459 ntBASIC14.27□□□□□ -0.13
Lim2P56563 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.27□□□□□ -0.13
Lim2P56563 Gm6222-201ENSMUST00000120787 396 ntBASIC14.27□□□□□ -0.13
Lim2P56563 Gm27622-201ENSMUST00000183779 60 ntBASIC14.27□□□□□ -0.13
Lim2P56563 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Lim2P56563 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lim2P56563 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lim2P56563 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.26□□□□□ -0.13
Lim2P56563 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.26□□□□□ -0.13
Lim2P56563 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.26□□□□□ -0.13
Lim2P56563 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lim2P56563 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Lim2P56563 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Lim2P56563 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Lim2P56563 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.26□□□□□ -0.13
Lim2P56563 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Gm10275-202ENSMUST00000168697 495 ntBASIC14.26□□□□□ -0.13
Lim2P56563 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.26□□□□□ -0.13
Lim2P56563 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.26□□□□□ -0.13
Lim2P56563 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.26□□□□□ -0.13
Lim2P56563 Gm10275-201ENSMUST00000092620 635 ntBASIC14.26□□□□□ -0.13
Lim2P56563 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Lim2P56563 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Lim2P56563 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lim2P56563 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lim2P56563 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.25□□□□□ -0.13
Lim2P56563 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lim2P56563 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.25□□□□□ -0.13
Lim2P56563 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.25□□□□□ -0.13
Lim2P56563 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.25□□□□□ -0.13
Lim2P56563 Gm38294-201ENSMUST00000192831 381 ntBASIC14.25□□□□□ -0.13
Lim2P56563 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.25□□□□□ -0.13
Lim2P56563 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.25□□□□□ -0.13
Lim2P56563 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.25□□□□□ -0.13
Lim2P56563 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lim2P56563 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Lim2P56563 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.24□□□□□ -0.13
Lim2P56563 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.24□□□□□ -0.13
Lim2P56563 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lim2P56563 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.24□□□□□ -0.13
Lim2P56563 Gm25925-201ENSMUST00000158314 306 ntBASIC14.24□□□□□ -0.13
Lim2P56563 Gm25144-201ENSMUST00000179561 110 ntBASIC14.24□□□□□ -0.13
Lim2P56563 Gm25352-201ENSMUST00000179815 110 ntBASIC14.24□□□□□ -0.13
Lim2P56563 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.24□□□□□ -0.13
Lim2P56563 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms