Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab4aP56371 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab4aP56371 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rab4aP56371 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab4aP56371 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab4aP56371 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rab4aP56371 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab4aP56371 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Rab4aP56371 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.25□□□□□ -0.61
Rab4aP56371 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Rab4aP56371 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.24□□□□□ -0.61
Rab4aP56371 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Rab4aP56371 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.24□□□□□ -0.61
Rab4aP56371 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rab4aP56371 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.24□□□□□ -0.61
Rab4aP56371 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Rab4aP56371 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rab4aP56371 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.23□□□□□ -0.61
Rab4aP56371 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.23□□□□□ -0.61
Rab4aP56371 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.23□□□□□ -0.61
Rab4aP56371 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.23□□□□□ -0.61
Rab4aP56371 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.23□□□□□ -0.61
Rab4aP56371 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.23□□□□□ -0.61
Rab4aP56371 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.23□□□□□ -0.61
Rab4aP56371 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rab4aP56371 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rab4aP56371 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms