Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.01□□□□□ -0.33
Cdh11P55288 Mir1895-201ENSMUST00000122615 79 ntBASIC13.01□□□□□ -0.33
Cdh11P55288 Gm11025-201ENSMUST00000140773 466 ntBASIC13.01□□□□□ -0.33
Cdh11P55288 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh11P55288 Gm27494-201ENSMUST00000184735 189 ntBASIC13.01□□□□□ -0.33
Cdh11P55288 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh11P55288 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Cdh11P55288 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13□□□□□ -0.33
Cdh11P55288 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13□□□□□ -0.33
Cdh11P55288 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdh11P55288 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13□□□□□ -0.33
Cdh11P55288 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Cdh11P55288 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdh11P55288 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh11P55288 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.99□□□□□ -0.33
Cdh11P55288 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cdh11P55288 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.99□□□□□ -0.33
Cdh11P55288 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Cdh11P55288 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh11P55288 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh11P55288 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Gm14701-201ENSMUST00000117156 348 ntBASIC12.99□□□□□ -0.33
Cdh11P55288 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdh11P55288 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdh11P55288 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.99□□□□□ -0.33
Cdh11P55288 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cdh11P55288 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdh11P55288 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Cdh11P55288 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh11P55288 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cdh11P55288 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.98□□□□□ -0.33
Cdh11P55288 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms