Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.93■□□□□ 0.46
Msh6P54276 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Msh6P54276 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.92■□□□□ 0.46
Msh6P54276 Gm45784-201ENSMUST00000188360 142 ntBASIC17.92■□□□□ 0.46
Msh6P54276 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.92■□□□□ 0.46
Msh6P54276 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.92■□□□□ 0.46
Msh6P54276 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Msh6P54276 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Msh6P54276 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.92■□□□□ 0.46
Msh6P54276 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Msh6P54276 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Msh6P54276 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.91■□□□□ 0.46
Msh6P54276 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.91■□□□□ 0.46
Msh6P54276 Gm14660-201ENSMUST00000119809 575 ntBASIC17.91■□□□□ 0.46
Msh6P54276 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Msh6P54276 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.91■□□□□ 0.46
Msh6P54276 Gm18027-201ENSMUST00000218947 619 ntBASIC17.91■□□□□ 0.46
Msh6P54276 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.91■□□□□ 0.46
Msh6P54276 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Msh6P54276 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Msh6P54276 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Msh6P54276 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.91■□□□□ 0.46
Msh6P54276 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.91■□□□□ 0.46
Msh6P54276 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Msh6P54276 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Msh6P54276 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Gm37424-201ENSMUST00000191727 561 ntBASIC17.91■□□□□ 0.46
Msh6P54276 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.91■□□□□ 0.46
Msh6P54276 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Msh6P54276 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.9■□□□□ 0.46
Msh6P54276 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Msh6P54276 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Msh6P54276 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.9■□□□□ 0.46
Msh6P54276 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Msh6P54276 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.9■□□□□ 0.46
Msh6P54276 Gm8062-201ENSMUST00000139696 444 ntBASIC17.9■□□□□ 0.46
Msh6P54276 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Msh6P54276 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Msh6P54276 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.9■□□□□ 0.46
Msh6P54276 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Msh6P54276 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Msh6P54276 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms