Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Fdft1P53798 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.25□□□□□ -0.13
Fdft1P53798 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.25□□□□□ -0.13
Fdft1P53798 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Gm11025-201ENSMUST00000140773 466 ntBASIC14.25□□□□□ -0.13
Fdft1P53798 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.25□□□□□ -0.13
Fdft1P53798 Gm27920-201ENSMUST00000183953 96 ntBASIC14.25□□□□□ -0.13
Fdft1P53798 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Fdft1P53798 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.25□□□□□ -0.13
Fdft1P53798 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Fdft1P53798 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Fdft1P53798 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.24□□□□□ -0.13
Fdft1P53798 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.24□□□□□ -0.13
Fdft1P53798 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Gm6973-201ENSMUST00000117080 721 ntBASIC14.24□□□□□ -0.13
Fdft1P53798 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.24□□□□□ -0.13
Fdft1P53798 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.24□□□□□ -0.13
Fdft1P53798 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.24□□□□□ -0.13
Fdft1P53798 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.24□□□□□ -0.13
Fdft1P53798 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.24□□□□□ -0.13
Fdft1P53798 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.24□□□□□ -0.13
Fdft1P53798 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.24□□□□□ -0.13
Fdft1P53798 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fdft1P53798 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.23□□□□□ -0.13
Fdft1P53798 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Fdft1P53798 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.23□□□□□ -0.13
Fdft1P53798 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.23□□□□□ -0.13
Fdft1P53798 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.23□□□□□ -0.13
Fdft1P53798 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.23□□□□□ -0.13
Fdft1P53798 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.23□□□□□ -0.13
Fdft1P53798 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.23□□□□□ -0.13
Fdft1P53798 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.23□□□□□ -0.13
Fdft1P53798 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Gm37230-201ENSMUST00000194491 818 ntBASIC14.23□□□□□ -0.13
Fdft1P53798 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.23□□□□□ -0.13
Fdft1P53798 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Fdft1P53798 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Fdft1P53798 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Fdft1P53798 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Fdft1P53798 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Fdft1P53798 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Fdft1P53798 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fdft1P53798 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms