Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sox1P53783 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sox1P53783 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.47□□□□□ -0.09
Sox1P53783 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox1P53783 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sox1P53783 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sox1P53783 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Sox1P53783 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.46□□□□□ -0.09
Sox1P53783 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sox1P53783 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sox1P53783 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sox1P53783 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sox1P53783 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sox1P53783 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sox1P53783 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.46□□□□□ -0.09
Sox1P53783 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.46□□□□□ -0.09
Sox1P53783 Gm5425-201ENSMUST00000214125 459 ntBASIC14.46□□□□□ -0.09
Sox1P53783 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.46□□□□□ -0.09
Sox1P53783 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.46□□□□□ -0.09
Sox1P53783 Gm8227-201ENSMUST00000223306 571 ntBASIC14.46□□□□□ -0.09
Sox1P53783 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox1P53783 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Sox1P53783 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.46□□□□□ -0.1
Sox1P53783 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox1P53783 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox1P53783 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.46□□□□□ -0.1
Sox1P53783 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Sox1P53783 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.46□□□□□ -0.1
Sox1P53783 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Sox1P53783 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.45□□□□□ -0.1
Sox1P53783 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Gm8749-201ENSMUST00000117737 331 ntBASIC14.45□□□□□ -0.1
Sox1P53783 Gm10156-201ENSMUST00000122364 462 ntBASIC14.45□□□□□ -0.1
Sox1P53783 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.45□□□□□ -0.1
Sox1P53783 Gm24990-201ENSMUST00000157406 323 ntBASIC14.45□□□□□ -0.1
Sox1P53783 Gm25668-201ENSMUST00000157700 129 ntBASIC14.45□□□□□ -0.1
Sox1P53783 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.45□□□□□ -0.1
Sox1P53783 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Sox1P53783 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.45□□□□□ -0.1
Sox1P53783 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sox1P53783 Snora73a-201ENSMUST00000082453 205 ntBASIC14.45□□□□□ -0.1
Sox1P53783 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox1P53783 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sox1P53783 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox1P53783 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sox1P53783 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sox1P53783 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms