Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Krt6aP50446 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.16□□□□□ -0.14
Krt6aP50446 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.16□□□□□ -0.14
Krt6aP50446 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Krt6aP50446 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Matn2-206ENSMUST00000228570 2798 ntBASIC14.16□□□□□ -0.14
Krt6aP50446 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt6aP50446 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.15□□□□□ -0.14
Krt6aP50446 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Krt6aP50446 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.15□□□□□ -0.14
Krt6aP50446 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.15□□□□□ -0.14
Krt6aP50446 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Krt6aP50446 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Krt6aP50446 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Krt6aP50446 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Krt6aP50446 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Krt6aP50446 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.15□□□□□ -0.14
Krt6aP50446 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Krt6aP50446 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Krt6aP50446 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Krt6aP50446 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.15□□□□□ -0.14
Krt6aP50446 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Krt6aP50446 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.15□□□□□ -0.14
Krt6aP50446 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.15□□□□□ -0.14
Krt6aP50446 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Krt6aP50446 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.15□□□□□ -0.14
Krt6aP50446 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt6aP50446 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Krt6aP50446 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Krt6aP50446 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Krt6aP50446 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.14□□□□□ -0.15
Krt6aP50446 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Krt6aP50446 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.14□□□□□ -0.15
Krt6aP50446 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Krt6aP50446 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.14□□□□□ -0.15
Krt6aP50446 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.14□□□□□ -0.15
Krt6aP50446 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Krt6aP50446 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.14□□□□□ -0.15
Krt6aP50446 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.14□□□□□ -0.15
Krt6aP50446 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt6aP50446 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt6aP50446 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt6aP50446 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt6aP50446 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt6aP50446 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms