Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ercc3P49135 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ercc3P49135 Gm5566-201ENSMUST00000116118 459 ntBASIC16.92■□□□□ 0.3
Ercc3P49135 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Gm10275-202ENSMUST00000168697 495 ntBASIC16.92■□□□□ 0.3
Ercc3P49135 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Shd-206ENSMUST00000225145 998 ntBASIC16.92■□□□□ 0.3
Ercc3P49135 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Gm10275-201ENSMUST00000092620 635 ntBASIC16.92■□□□□ 0.3
Ercc3P49135 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ercc3P49135 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.92■□□□□ 0.3
Ercc3P49135 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.92■□□□□ 0.3
Ercc3P49135 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.92■□□□□ 0.3
Ercc3P49135 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ercc3P49135 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.91■□□□□ 0.3
Ercc3P49135 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.91■□□□□ 0.3
Ercc3P49135 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Gm15920-201ENSMUST00000118998 402 ntBASIC16.91■□□□□ 0.3
Ercc3P49135 Gm12151-201ENSMUST00000121374 290 ntBASIC16.91■□□□□ 0.3
Ercc3P49135 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ercc3P49135 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Gm27533-201ENSMUST00000183800 152 ntBASIC16.91■□□□□ 0.3
Ercc3P49135 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.91■□□□□ 0.3
Ercc3P49135 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ercc3P49135 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.91■□□□□ 0.3
Ercc3P49135 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.91■□□□□ 0.3
Ercc3P49135 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ercc3P49135 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ercc3P49135 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.9■□□□□ 0.3
Ercc3P49135 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.9■□□□□ 0.3
Ercc3P49135 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ercc3P49135 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.9■□□□□ 0.3
Ercc3P49135 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.9■□□□□ 0.3
Ercc3P49135 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Ercc3P49135 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Gm12428-201ENSMUST00000119844 727 ntBASIC16.9■□□□□ 0.3
Ercc3P49135 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.9■□□□□ 0.3
Ercc3P49135 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Dupd1-202ENSMUST00000224735 548 ntBASIC16.9■□□□□ 0.3
Ercc3P49135 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.9■□□□□ 0.3
Ercc3P49135 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ercc3P49135 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.9■□□□□ 0.3
Ercc3P49135 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ercc3P49135 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Ercc3P49135 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ercc3P49135 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Ercc3P49135 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Gm24543-201ENSMUST00000103867 82 ntBASIC16.89■□□□□ 0.29
Ercc3P49135 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.89■□□□□ 0.29
Ercc3P49135 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Gm20949-201ENSMUST00000206478 952 ntBASIC16.89■□□□□ 0.29
Ercc3P49135 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.89■□□□□ 0.29
Ercc3P49135 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.89■□□□□ 0.29
Ercc3P49135 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ercc3P49135 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms