Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TgfaP48030 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.33□□□□□ -0.44
TgfaP48030 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.33□□□□□ -0.44
TgfaP48030 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TgfaP48030 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TgfaP48030 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.32□□□□□ -0.44
TgfaP48030 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.32□□□□□ -0.44
TgfaP48030 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.32□□□□□ -0.44
TgfaP48030 Gm11814-201ENSMUST00000119515 929 ntBASIC12.32□□□□□ -0.44
TgfaP48030 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.32□□□□□ -0.44
TgfaP48030 Gm15429-201ENSMUST00000151268 798 ntBASIC12.32□□□□□ -0.44
TgfaP48030 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TgfaP48030 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Gm27847-201ENSMUST00000183711 107 ntBASIC12.32□□□□□ -0.44
TgfaP48030 Gm27375-201ENSMUST00000183799 107 ntBASIC12.32□□□□□ -0.44
TgfaP48030 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.32□□□□□ -0.44
TgfaP48030 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TgfaP48030 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.32□□□□□ -0.44
TgfaP48030 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TgfaP48030 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TgfaP48030 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.31□□□□□ -0.44
TgfaP48030 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TgfaP48030 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.31□□□□□ -0.44
TgfaP48030 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.31□□□□□ -0.44
TgfaP48030 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
TgfaP48030 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.31□□□□□ -0.44
TgfaP48030 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.31□□□□□ -0.44
TgfaP48030 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Gm27731-201ENSMUST00000185192 107 ntBASIC12.31□□□□□ -0.44
TgfaP48030 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TgfaP48030 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TgfaP48030 Gm37424-201ENSMUST00000191727 561 ntBASIC12.31□□□□□ -0.44
TgfaP48030 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.31□□□□□ -0.44
TgfaP48030 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.31□□□□□ -0.44
TgfaP48030 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.31□□□□□ -0.44
TgfaP48030 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TgfaP48030 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TgfaP48030 Olfr582-201ENSMUST00000098212 960 ntBASIC12.31□□□□□ -0.44
TgfaP48030 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.31□□□□□ -0.44
TgfaP48030 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TgfaP48030 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.31□□□□□ -0.44
TgfaP48030 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.31□□□□□ -0.44
TgfaP48030 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.31□□□□□ -0.44
TgfaP48030 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TgfaP48030 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TgfaP48030 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TgfaP48030 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TgfaP48030 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TgfaP48030 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TgfaP48030 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms