Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.78□□□□□ -0.52
Hist1h1aP43275 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hist1h1aP43275 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.78□□□□□ -0.52
Hist1h1aP43275 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hist1h1aP43275 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist1h1aP43275 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.77□□□□□ -0.52
Hist1h1aP43275 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Hist1h1aP43275 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.77□□□□□ -0.52
Hist1h1aP43275 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Hist1h1aP43275 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Hist1h1aP43275 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist1h1aP43275 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist1h1aP43275 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist1h1aP43275 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Gm13036-201ENSMUST00000117799 748 ntBASIC11.77□□□□□ -0.53
Hist1h1aP43275 Gm13464-201ENSMUST00000119418 935 ntBASIC11.77□□□□□ -0.53
Hist1h1aP43275 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Gm28659-201ENSMUST00000188013 759 ntBASIC11.77□□□□□ -0.53
Hist1h1aP43275 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Gm5864-201ENSMUST00000202263 970 ntBASIC11.77□□□□□ -0.53
Hist1h1aP43275 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.77□□□□□ -0.53
Hist1h1aP43275 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.77□□□□□ -0.53
Hist1h1aP43275 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist1h1aP43275 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.76□□□□□ -0.53
Hist1h1aP43275 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Gm13884-201ENSMUST00000118103 829 ntBASIC11.76□□□□□ -0.53
Hist1h1aP43275 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.76□□□□□ -0.53
Hist1h1aP43275 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.76□□□□□ -0.53
Hist1h1aP43275 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms