Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-2P42586 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-2P42586 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Gm16476-201ENSMUST00000221544 139 ntBASIC13.07□□□□□ -0.32
Nkx2-2P42586 Dupd1-202ENSMUST00000224735 548 ntBASIC13.07□□□□□ -0.32
Nkx2-2P42586 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-2P42586 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Gm24543-201ENSMUST00000103867 82 ntBASIC13.06□□□□□ -0.32
Nkx2-2P42586 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 AA543401-201ENSMUST00000164248 1269 ntBASIC13.06□□□□□ -0.32
Nkx2-2P42586 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.06□□□□□ -0.32
Nkx2-2P42586 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.06□□□□□ -0.32
Nkx2-2P42586 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Nkx2-2P42586 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-2P42586 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Gm12428-201ENSMUST00000119844 727 ntBASIC13.05□□□□□ -0.32
Nkx2-2P42586 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Gm25948-201ENSMUST00000175334 112 ntBASIC13.05□□□□□ -0.32
Nkx2-2P42586 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.05□□□□□ -0.32
Nkx2-2P42586 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.05□□□□□ -0.32
Nkx2-2P42586 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms