Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.88□□□□□ -0.51
Abca1P41233 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.88□□□□□ -0.51
Abca1P41233 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.88□□□□□ -0.51
Abca1P41233 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Abca1P41233 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.88□□□□□ -0.51
Abca1P41233 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Abca1P41233 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Abca1P41233 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.87□□□□□ -0.51
Abca1P41233 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Gm8602-201ENSMUST00000184045 607 ntBASIC11.87□□□□□ -0.51
Abca1P41233 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.87□□□□□ -0.51
Abca1P41233 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Abca1P41233 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.87□□□□□ -0.51
Abca1P41233 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Abca1P41233 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Abca1P41233 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.87□□□□□ -0.51
Abca1P41233 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Abca1P41233 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Abca1P41233 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Abca1P41233 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.86□□□□□ -0.51
Abca1P41233 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.86□□□□□ -0.51
Abca1P41233 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.86□□□□□ -0.51
Abca1P41233 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.86□□□□□ -0.51
Abca1P41233 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Abca1P41233 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Abca1P41233 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Abca1P41233 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.86□□□□□ -0.51
Abca1P41233 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.86□□□□□ -0.51
Abca1P41233 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.86□□□□□ -0.51
Abca1P41233 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.86□□□□□ -0.51
Abca1P41233 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.86□□□□□ -0.51
Abca1P41233 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Gm21854-201ENSMUST00000179901 471 ntBASIC11.86□□□□□ -0.51
Abca1P41233 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.86□□□□□ -0.51
Abca1P41233 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.86□□□□□ -0.51
Abca1P41233 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Abca1P41233 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Abca1P41233 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Abca1P41233 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Gm13829-201ENSMUST00000119600 138 ntBASIC11.85□□□□□ -0.51
Abca1P41233 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Abca1P41233 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Abca1P41233 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Abca1P41233 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.85□□□□□ -0.51
Abca1P41233 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Abca1P41233 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms