Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdh4P39038 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Cdh4P39038 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdh4P39038 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.66□□□□□ -0.22
Cdh4P39038 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdh4P39038 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.65□□□□□ -0.22
Cdh4P39038 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
Cdh4P39038 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.65□□□□□ -0.22
Cdh4P39038 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Gm25144-201ENSMUST00000179561 110 ntBASIC13.65□□□□□ -0.22
Cdh4P39038 Gm25352-201ENSMUST00000179815 110 ntBASIC13.65□□□□□ -0.22
Cdh4P39038 Gm27622-201ENSMUST00000183779 60 ntBASIC13.65□□□□□ -0.22
Cdh4P39038 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdh4P39038 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cdh4P39038 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cdh4P39038 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Cdh4P39038 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh4P39038 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cdh4P39038 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Cdh4P39038 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh4P39038 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh4P39038 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh4P39038 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Cdh4P39038 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cdh4P39038 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cdh4P39038 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh4P39038 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.64□□□□□ -0.23
Cdh4P39038 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.64□□□□□ -0.23
Cdh4P39038 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.64□□□□□ -0.23
Cdh4P39038 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.64□□□□□ -0.23
Cdh4P39038 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh4P39038 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Cdh4P39038 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh4P39038 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdh4P39038 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Cdh4P39038 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdh4P39038 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cdh4P39038 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.63□□□□□ -0.23
Cdh4P39038 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh4P39038 Gm23547-201ENSMUST00000158210 271 ntBASIC13.63□□□□□ -0.23
Cdh4P39038 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms